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MarieD - NGS analysis
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MarieD

NGS analysis
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • scRNA-seq analysis
  • Gene expression array analysis
Languages
  • French
Programming languages
  • Perl

Fields of interest

RNA-seq analysis
Determines transcript-level abundance on reduced-representation expression…
Aims at providing a functional annotation tool for the genetic variation, using…
Performs computation of distance precision matrix and regularized distance…
scRNA-seq analysis
Tests for association between the observed data and their systematic patterns…
A method for analysis and characterization of single-cell isoform-level gene…
Assists users with simulation of single cell RNA-Seq data. SymSim models three…
Gene expression array analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Contains a library to process over- and under-representation of certain gene…
Classifies protein sequence and identifies remote protein homology via…