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Erica Souza - Phylogeny analysis
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Erica Souza

Phylogeny analysis
State University of Campinas • Campinas • Brazil

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • English
  • Portuguese
  • Spanish
Programming languages
  • R

Reviews and Discussions


MEGA 2017-11-08, 18:34:48
It is a free phylogenetic tool which allow MEGA to reach many users. Although this, it is necessary that users know that MEGA is a blackbox, and you cannot change the software parameters, if you are…
RAxML 2017-11-08, 18:30:12
Software based on command lines, it is not friendly to use if you don't understand clearly how command line work. Although the initial difficult to the language the software have a interesting…


No discussions...

Fields of interest

WGS analysis
Jointly analyzes two traits using de novo exome sequencing data. mTADA scans de…
Estimates area under the ROC curve (AUC) and its standard error for a polygenic…
Allows users to handle sequencing data with unique molecular identifiers…
RNA-seq analysis
Predicts gene regulatory regions from genome sequences. DeepGMAP supplies a…
Carries out gene expression correlation analysis. GECO is a web server that…
Cluster-select the optimal number of clusters and removes outlier objects.…
Metagenomic sequencing analysis
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Allows comparison and separation of orthology relationships. CAT uses the…
Assists researchers in analyzing Tax4Fun Output. KO2Path-Path2Class is a script…