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Evan Barba - PhD Candidate
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Evan Barba

PhD Candidate
National Oceanic and Atmospheric Administration • University of HawaiĘ»i Sea Grant • Honolulu • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Identifies somatic copy number variations (CNVs). SCDT proposes an application…
Assesses Alu/Alu-mediated rearrangement (AAMR) hotspots and their role in human…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
De novo sequencing analysis
Allows users to handle sequencing data with unique molecular identifiers…
Allows users to conduct large-scale comparisons of their results with thousands…
Identifies transposable elements (TEs) of a particular order and classifies…
Metagenomic sequencing analysis
Allows users to filter, convert and combine multiple data files produced by…
Serves as a dynamic alignment-free and reference-free read compression tool.…
Executes exact variance component tests in longitudinal microbiome study.…