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Frantisek Sklenar - phylogenetics
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Frantisek Sklenar

phylogenetics
Charles University • Prague • Czech Republic

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • R

Fields of interest

WGS analysis
Genotype tandem repeats (TRs) at population scale. GtTR is a probabilistic…
Aims to address the cluster containment problem for phylogenetic networks.…
Determines functional target genes by leveraging naturally occurring…
De novo sequencing analysis
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
RNA-seq analysis
Identifies genotypic loci and covariates with effects on phenotypic variance.…
Offers an approach for quantifying transposable elements (TEs) from next…
Processes raw reads to count tables for RNA-seq data using Unique Molecular…