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Gilles Mathieu - Research Engineer - Scientific Computing
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Gilles Mathieu

Research Engineer - Scientific Computing
French Institute of Health and Medical Research • Paris • France

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • cryo-EM
Languages
  • English
  • French
  • German

Fields of interest

RNA-seq analysis
Constructs publication-quality visualizations from Cuffdiff, edgeR, and DESeq2.…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
ChIP-seq analysis
Calculates average amino-acid identity (AAI) between a query proteome and all…
Simultaneously quantifies differences in differential transcription factor (TF)…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
cryo-EM
Determines the content of all possible windows in the micrograph via a support…
Allows users to segment cardiac ultrastructure from serial block-face scanning…
Permits the treatment of cryo-electron microscopy (cryo-EM) images of…