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Gregory Grant - Reserach Associate Professor
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Gregory Grant

Reserach Associate Professor
University of Pennsylvania • Philadelphia • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Perl

TOOLS MAINTAINED

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RUM

Desktop

RUM

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Allows users to align, and quantify feature about Illumina RNA-Seq data. RUM can be used for DNA sequencing and microarray probe mapping. This alignment pipeline is able to map reads in three phases:…

Fields of interest

RNA-seq analysis
An artificial neural networks (ANN) framework to predict patient prognosis from…
Assists users in reading TIGER-rate file or other rate files. RatePartitions…
Provides an online platform for collecting, managing, analyzing, visualizing…
BS-seq analysis
Allows users to filter, convert and combine multiple data files produced by…
Supplies a set of features dedicated to quality check (QC) of next generation…
Serves for Illumina short read sequencing data. PriLive allows users to remove…
Gene expression array analysis
Serves for processing Infinium DNA methylation data. SeSAMe consists of light…
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Assists users for visualizing ancestry data. AncestryView first proceeds by…