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Agnieszka Gromadka - NGS data analysis
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Agnieszka Gromadka

NGS data analysis
Polish Academy of Sciences • Warsaw • Poland

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression microarray analysis
Languages
  • English
Programming languages
  • Python
  • R

Fields of interest

RNA-seq analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Aims to infer causal graphs. MRPC is a machine learning algorithm that…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Metagenomic sequencing analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Gene expression microarray analysis
Assists users for annotating transcriptome and functional analysis of…
Enables exploration and classification of large collections of gene clusters.…
Changes nucleotide sequences into interactive browser-based two-dimensional…