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Hannah Mn - NGS pipeline developer
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Hannah Mn

NGS pipeline developer
Isfahan University of Medical Sciences • Isfahan • Iran

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • Metagenomic sequencing analysis
Languages
  • English

Fields of interest

WGS analysis
Finds pathway genes from KEGG pathway database. KPGminer retrieves constituent…
Provides a collection of open-source tools and resources for modelling,…
Permits visualization and annotation of copy number variations (CNVs) analysis…
WES analysis
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Applies an information theoretic approach for effective feature mining and…
Metagenomic sequencing analysis
Allows microbial metataxonomic investigation. BTW is composed of a set of tools…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Maps ethyl methanesulfonate (EMS)-induced mutations in forward genetic screens…