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He Jing - Genomics
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He Jing

Genomics
Tsinghua University • Beijing • China

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • Chinese
Programming languages
  • Perl
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
Performs identification of peptides harboring single amino acid variants and…
Provides a method that evaluates saturated DNA mixtures to identify saturated…
RNA-seq analysis
Provides several tools for processing phylogenetic. Gappa can automatically…
Facilitates long non-coding RNAs (LncRNAs) identification and analysis.…
Classifies protein sequence and identifies remote protein homology via…
ChIP-seq analysis
Measures genomic features such as gene expression levels over time. DPGP is a…
Combines structural variation (SV) calls from different algorithms to reduce…
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…