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Heike Cappallo-Obermann - Analysis of RNAseq data
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Heike Cappallo-Obermann

Analysis of RNAseq data
University Medical Center Hamburg-Eppendorf • Hamburg • Germany

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • scRNA-seq analysis
  • Gene expression array analysis
Languages
  • German
Programming languages
  • R

Fields of interest

RNA-seq analysis
Assists users in analyzing next-generation sequencing (NGS) data. snakePipes…
Predicts protein-coding potential on transcripts. mRNN is capable of learning…
Detects RNA editing by learning and summarizing essential features from the…
scRNA-seq analysis
Allows unsupervised and semi-supervised learning using Single Cell RNA-Seq…
Enables to build custom genome browsers. GIVe is a programming library allowing…
Aims to improve the characterization of single-cell transcriptomic profiles.…
Gene expression array analysis
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Supports the validation of experiments by annotating variants and prioritizing…
Provides an online platform for collecting, managing, analyzing, visualizing…