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Ivan Arisi - genomics data analysis
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Ivan Arisi

genomics data analysis
Fondazione EBRI Rita Levi-Montalcini • Italy

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • scRNA-seq analysis
  • Gene expression array analysis
Languages
  • English
  • French
  • Italian
Programming languages
  • C
  • R

Fields of interest

RNA-seq analysis
Recognizes and determines expression quantitative trait loci (eQTL). PolyQTL…
Analyzes RNA-seq count data. dNBFA is built on a Bayesian covariate-dependent…
Allows users to see expression profiles, to examine expression specificity,…
scRNA-seq analysis
Extends the Integrative Genomics Viewer (IGV) with feature for curation…
Provides an approach for integrating transcript assemblies. Mikado is a…
Assists users in threshold decision for single cell RNA-seq analyzing.…
Gene expression array analysis
Discovers low-rank biclusters within a large data-matrix. This method can be…
Cluster-select the optimal number of clusters and removes outlier objects.…
Supports the validation of experiments by annotating variants and prioritizing…