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JAMES HERRICK - Environmental Microbiologist
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JAMES HERRICK

Environmental Microbiologist
James Madison University • Harrisonburg • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • English

Fields of interest

WGS analysis
Employs gene expression heterogeneity to identify genes relating to biological…
Identifies somatic single nucleotide variants (SNVs). S22S detects somatic SNV…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
De novo sequencing analysis
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Assists users in processing and similarity searching of next-generation…
Allows users to process targeted enriched Illumina sequences from raw reads to…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Consists of a Bayesian, unsupervised, integrative clustering model for…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…