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Jacob Herman

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Fred Hutchinson Cancer Research Center • Seattle • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • Mass spectrometry imaging
Languages
  • English

Fields of interest

Genome edition
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
RNA-seq analysis
Allows clustering of large-scale networks. HipMCL is a distributed-memory…
Integrates existing data on proteins in budding yeast. GEMMER is a web-based…
Allows users to optimize a scoring function for pairwise-profile alignment…
Mass spectrometry imaging
Allows visualization of characteristics of liquid chromatography–mass…
Plots and overlays interactive 2D maps from deconvoluted liquid chromatography…
Assists users with the detection of peaks associated with non-realistic spatial…