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Jacquelyn Lillis - Bioinformatics
Open to new opportunities
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Open to new opportunities

Jacquelyn Lillis

Bioinformatics
University of Rochester • Rochester • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • English
Programming languages
  • Perl
  • R

Fields of interest

De novo sequencing analysis
Allows the simultaneous fitting of distributions of fitness effects (DFE)…
Aligns population origins from non-cancer single nucleotide polymorphism (SNP)…
Serves for the classification of metagenomics data. Ph-CNN contains a deep…
RNA-seq analysis
Compares differential abundance and expression methods on a targeted dataset.…
Allows users to process targeted enriched Illumina sequences from raw reads to…
Predicts de novo profile generation based on sequence context. SPBuild…
ChIP-seq analysis
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Provides several scripts to predict active enhancers and promoters in a cell…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…