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Jacquelyn Lillis - Bioinformatics
Open to new opportunities
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Open to new opportunities

Jacquelyn Lillis

University of Rochester • Rochester • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • scRNA-seq analysis
  • English
Programming languages
  • Perl
  • R
  • Shell (Bash)

Fields of interest

RNA-seq analysis
Provides a tool to select the band width according to the read’s error rates.…
Maps reads on a reference genome and then analyzes them. FaRLine employs a…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
Metagenomic sequencing analysis
Assists for merging overlapping paired-end reads. OverlapPER returns both…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
Offers a model investigating longitudinal and progressive dynamics of metabolic…
scRNA-seq analysis
Addresses the lack of a comprehensive workflow for processing sequencing data…
Constructs publication-quality visualizations from Cuffdiff, edgeR, and DESeq2.…
Identifies functionally relevant pairs of genes that are complementary to…