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Jeff Bruce - Computational Cancer Biologist
Open to new opportunities
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Open to new opportunities

Jeff Bruce

Computational Cancer Biologist
University Health Network • Toronto • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Serves for copy number variation-based association study data analysis. CoNVaQ…
Assists users in processing and similarity searching of next-generation…
Aligns population origins from non-cancer single nucleotide polymorphism (SNP)…
WES analysis
Performs somatic variant calling. DeepSomatic consists of a convolutional…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
Supplies a set of features dedicated to quality check (QC) of next generation…
RNA-seq analysis
Corrects batch effects (from multiple confounding variables) and library depth.…
Assists users in optimized block trimming. This algorithm is a polynomial-time…
Automatically combines transcriptomes from difference sources, such as assembly…