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Jennifer Jankowiak

State University of New York • Stony Brook University • Stony Brook • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • English
Programming languages
  • R

Fields of interest

De novo sequencing analysis
Detects degenerate nucleotide motif matches in FASTA files. Motif Scraper…
Constructs networks and allows users to display prokaryotic pangenomes for both…
Provides a neighbor protein structure retrieval method. ContactLib scans…
RNA-seq analysis
Allows users to perform alternative splicing investigations. Matt provides more…
A robust rank-based classifier for gene expression classification. AUCTSP works…
Maps a read against a reference region if and only if its estimated alignment…
Metagenomic sequencing analysis
Enables evaluation, filtering, and analysis of gene models, as well as…
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Permits users to analyze data from Oxford Nanopore technology (ONT) MinION…