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Jérôme Bourret - Ph.D.
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Jérôme Bourret

Languedoc-Roussillon Universities • Institute of Research for Development • Marseille • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • English
  • French
Programming languages
  • C++
  • Perl
  • PHP
  • Python
  • R

Fields of interest

WGS analysis
Allows individual based forward simulations of evolving populations. MimicrEE2…
Jointly analyzes two traits using de novo exome sequencing data. mTADA scans de…
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
De novo sequencing analysis
Enables hierarchical multi-step assembly of large DNA fragments. MetClo uses…
Identifies local ancestry segments, without requiring prior knowledge of mixing…
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Metagenomic sequencing analysis
Assists for merging overlapping paired-end reads. OverlapPER returns both…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Predicts de novo profile generation based on sequence context. SPBuild…