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Jessie van Buggenum - PhD student Radboud University
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Jessie van Buggenum

PhD student Radboud University
Radboud University Nijmegen • Nijmegen • Netherlands

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • English
Programming languages
  • R

Fields of interest

WGS analysis
Permits detection of mosaic structural variants from linked-read exome and…
Identifies insertions and deletions (indels) from DNA-seq or RNA-seq data.…
Processes raw reads to count tables for RNA-seq data using Unique Molecular…
RNA-seq analysis
Allows users to determine gene ontology (GO) annotations for incompletely…
Consists of a dimension reduction technique designed for complex data sets with…
Examines epigenomic and transcriptomic next generation sequencing (NGS) data.…
BS-seq analysis
Provides solution for clustering sparse single-cell DNA methylation data.…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…