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Jianting Sheng - computational biology in cancer research
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Jianting Sheng

computational biology in cancer research
Methodist Hospital • Houston • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Quantifies miRNA from small RNA-seq. miR-MaGiC minimizes noise associated with…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Gene expression array analysis
Cluster-select the optimal number of clusters and removes outlier objects.…
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Contains a library to process over- and under-representation of certain gene…
Protein interaction analysis
Decomposes the sources of heterogeneity in multi-omics data sets. MOFA…
Generates and analyzes executable models from single-cell gene expression data.…
Predicts RNA protein interaction via extreme gradient boosting classifier named…