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Jinrui Xu

Yale University • New Haven • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • Gene expression array analysis
  • English
Programming languages
  • C
  • Perl
  • R

Fields of interest

RNA-seq analysis
Enables decomposition of a gene tree into trees consistent with a species tree.…
Allows users to compare genomic structures and annotations across multiple…
Enables the application of gene set tests (GST) in the absence of large parts…
ChIP-seq analysis
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Allows users to deduce E-P links based on correlated activity patterns across…
Gene expression array analysis
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Gathers investigations of phytohormone responses. GSHR employs the integration…