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Jody Longo - Cancer research
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Jody Longo

Cancer research
Medical University of South Carolina • Charleston • United States of America

Skills and expertise

Fields of interest
  • WES analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • R

Fields of interest

WES analysis
Allows integration and visualization of population genetics, mutation damage…
Combines structural variation (SV) calls from different algorithms to reduce…
Clusters tumors based on the somatic mutation spectra of the putative cancer…
RNA-seq analysis
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Identifies high-risk individuals for cancers based on their germline genomic…
Protein interaction analysis
Merges the information encoded in the kinase with the information encoded in…
Decomposes the sources of heterogeneity in multi-omics data sets. MOFA…
Predicts gene regulatory regions from genome sequences. DeepGMAP supplies a…