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Johannes Soeding - Quantitative and Computational Biology gropu
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Johannes Soeding

Quantitative and Computational Biology gropu
Max Planck Society • Max Planck Institute for Biophysical Chemistry • Göttingen • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • C++

Fields of interest

WGS analysis
Enables linkage disequilibrium (LD) decay analysis. PopLDdecay allows…
Discovers the mean in a partition distribution. mean_partition is based on an…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
De novo sequencing analysis
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Discovers the mean in a partition distribution. mean_partition is based on an…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Metagenomic sequencing analysis
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…
Clarifies detailed evolutionary relationships between gene clusters. CORASON…