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Jose Mari Herranz Alzueta - RNAseq
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Jose Mari Herranz Alzueta

RNAseq
University of Navarra • Pamplona • Spain

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • C++

Fields of interest

WGS analysis
Generates a tiered report that will aid the interpretation of individual cancer…
Serves as a scalable composition tool for implementing asynchronous Boolean…
Allows users to simulate copy number variants (CNVs) for whole exome sequencing…
De novo sequencing analysis
Performs DNA sequence classification tasks. Kameris implements a technique…
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…
Calculates average amino-acid identity (AAI) between a query proteome and all…
RNA-seq analysis
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Serves as a hybrid multiobjective memetic metaheuristic for multiple sequence…
Detects trans-regulatory effects. GBAT is a gene-based method that consists of…