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Jose Negron La Rosa

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Boston Children's Hospital • Boston • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • De novo sequencing analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Provides an alignment-free single nucleotide polymorphism (SNP) genotyping…
Enables distributed, likelihood-free inference for computationally demanding…
Computes positively selected candidate variants for functional follow-up.…
WES analysis
Assists in finding a sequence of inversions that has minimum length-weighted…
Aligns raw reads directly against redundant databases. KMA is an alignment…
Provides a tool to select the band width according to the read’s error rates.…
De novo sequencing analysis
Retrieves coding regions of mt genomes from RNA-seq data. Trimitomics proposes…
Registers and associates the barcode data required to order and orient draft…
Simulates various mating processes. MatSim allows users to mimic both discrete…