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Joseph Ndika - Systems Immunotoxicology
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Joseph Ndika

Systems Immunotoxicology
University of Helsinki • Helsinki • Finland

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
  • French

Fields of interest

RNA-seq analysis
Serves for Illumina short read sequencing data. PriLive allows users to remove…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Gene expression array analysis
Stores projects and creates a directory of analysed results and parameter.…
Enables evaluation, filtering, and analysis of gene models, as well as…
Discovers trend-preserved biclusters of any shape in any types of datasets.…
Protein interaction analysis
Predicts drug–target binding affinity using only sequences of proteins and…
Offers an integration of deep learning for complex image analysis. HRMAn is a…
Assists users with virtual screening. BindScope is a web GPU-accelerated…