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Julio Freyre-Gonzalez - Head of the Regulatory Systems Biology Research Group
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Julio Freyre-Gonzalez

Head of the Regulatory Systems Biology Research Group
National Autonomous University of Mexico • Mexico City • Mexico

Skills and expertise

Fields of interest
  • Synthetic biology
  • Gene expression microarray analysis
  • Protein interaction analysis
Languages
  • English
  • Spanish
Programming languages
  • Assembly language
  • C
  • C++
  • Java
  • Javascript
  • Pascal
  • Perl
  • PHP
  • Python
  • Shell (Bash)

Work experience

Associate Professor
Center for Genomic Sciences, UNAM - Cuernavaca, Mexico
September 2012 - Today
Head of the Regulatory Systems Biology Research Group

Bioinformatics projects

TOOLS MAINTAINED

Abasy Atlas

Dataset

Abasy Atlas / Across-bacteria systems Atlas

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Provides a comprehensive atlas of annotated functional systems, global network properties and systems-level elements. Abasy Atlas provides data enabling large-scale comparative systems biology…

Education

Ph.D., Biochemistry
Instituto de Biotecnologia, UNAM
2003 - 2009
Areas of study: Bioinformatics, Computational Genomics and Systems Biology / Thesis: “Dissecting the functional architecture of the Escherichia coli transcriptional regulatory network: a natural decomposition approach”
M.Sc., Computer Science
Tec de Monterrey, campus Cuernavaca
1999 - 2000
Areas of study: Artificial Intelligence, Machine Learning, and Data Mining / Thesis: “Behavioral cloning of control abilities from human to machine: a Bayesian approach”
B.Sc., Computer Systems Engineering
Instituto Tecnologico de Veracruz
1990 - 1994

Fields of interest

Synthetic biology
Assists users in experimental design in microplate experiments. PlateDesigner…
Designs oligonucleotides for targeted integration using the pGTag vector suite.…
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Gene expression microarray analysis
Assists users for annotating transcriptome and functional analysis of…
Enables exploration and classification of large collections of gene clusters.…
Changes nucleotide sequences into interactive browser-based two-dimensional…
Protein interaction analysis
Allows researchers to determine the magnetic and electronic properties of…
Serves for regularized kernel methods, focusing especially on regularized…
Furnishes a solution for finding changes in gene networks and for aiding in the…