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Sean Jungbluth - Genome-resolved metagenomics.
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Open to new opportunities

Sean Jungbluth

Genome-resolved metagenomics.
United States Department of Energy • Joint Genome Institute • Walnut Creek • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

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Additional information

jungbluthlab.org

Fields of interest

WGS analysis
Allows users to measure polygenic risk scores (PRS). PRSoS provides enhanced…
Assists users in annotating TP53 information derived from sequencing data.…
Estimates the breed ancestry of crossbred cattle using high-density single…
De novo sequencing analysis
Allows users to measure biodiversity. Mobr is an R package proposing a…
Permits users to test gene-set enrichment directly from de novo (DN) and rare…
Allows users to extract a statistically significant subset of a determined set…
Metagenomic sequencing analysis
Allows microbial metataxonomic investigation. BTW is composed of a set of tools…
Identifies structural variation across (1) a collection of assemblies and (2) a…
Constructs networks and allows users to display prokaryotic pangenomes for both…