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Ka-Kyung Kim - PhD
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Ka-Kyung Kim

PhD
Yonsei University • Seoul • Republic of Korea

Skills and expertise

Fields of interest
  • WGS analysis
  • aCGH data analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

WGS analysis
Assists users with model selection in model-based clustering of mixed-data with…
Manages primary next generation sequencing (NGS) reads to produce data needed…
Detects structural variants (SVs) and insertion and deletion genome-wide…
aCGH data analysis
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Combines several steps for a high-quality probe and primer design for a variety…
Protein interaction analysis
Estimates the model parameters from experimental data, as well as to quantify…
Predicts adenosine-5’-triphosphate (ATP) specific binding sites. ATPbind…
Serves for identifying regulons and validating gene regulatory networks.…