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Karla Lindquist - Scientist
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Karla Lindquist

Scientist
University of California System • University of California, San Francisco • San Francisco • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Allows users to streamline the investigation and decision-making process for…
Consists of an interactive working environment that allows users to apply the…
Generates and filters recombinase polymerase amplification (RPA) primers and…
RNA-seq analysis
Serves for identifying regulons and validating gene regulatory networks.…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Identifies combined sequence and structure motifs. SMARTIV associates the RNA…
Protein interaction analysis
Predicts affinity for novel molecules, makes derivative prioritization and…
Merges the information encoded in the kinase with the information encoded in…
Provides an approach for the generation of ligand images filling protein…