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Katerina Hrochova - NGS
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Katerina Hrochova

NGS
Fakultní Nemocnice Hradec Králové • Hradec Králové • Czech Republic

Skills and expertise

Fields of interest
  • WGS analysis
  • MS-based untargeted metabolomics
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Permits users to test gene-set enrichment directly from de novo (DN) and rare…
Investigates mutation count data to assess the signatures of mutational…
Provides a high-risk pedigrees (HRP) method. SGS recognizes segregating…
MS-based untargeted metabolomics
Provides a package for metabolic modeling of microbial communities. Micom…
Investigates metabolites and their combinations in diseases. The program is…
Solves multiple peptide candidates that may match to a tandem mass spectrometry…
Protein interaction analysis
Characterizes associations between two data types. sSCCA is a method based on…
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Estimates interaction partners from sequence data among the paralogous proteins…