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Laurence Garczarek - Research Scientist CNRS
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Laurence Garczarek

Research Scientist CNRS
French National Centre for Scientific Research • Paris • France

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • French
Programming languages
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Provides inference of gene regulations using eQTLs as causal anchors by…
Assists users in searching somatic copy number alterations in whole genome…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
RNA-seq analysis
Clusters and annotates contigs from de novo transcriptome assemblies. Grouper…
Performs computation of distance precision matrix and regularized distance…
Handles repeated sequences for phylogenic inference. GCTree allows users to…
Metagenomic sequencing analysis
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Facilitates phylogenomic analyses on microeukaryotes. GPSit is an automated…
Offers a powerful approach for metagenomic profiling of antibiotic resistance…