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Letizia Chiodo - Researcher in Biophysics
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Letizia Chiodo

Researcher in Biophysics
Universit√† Campus Bio-Medico • Rome • Italy

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • BS-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Fortran

Fields of interest

De novo sequencing analysis
Predicts effectors in oomycete genomes, or with custom scripts for any genome.…
Allows users to filter, convert and combine multiple data files produced by…
Allows users to compare genomic structures and annotations across multiple…
BS-seq analysis
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Assists users in optimized block trimming. This algorithm is a polynomial-time…
Allows users to perform quality control (QC) and diagnostic analyses of…
Protein interaction analysis
Estimates the model parameters from experimental data, as well as to quantify…
Assists users to identify DNA methylation in distal regions with a causal…
Predicts cancer-specific synthetic lethal (SL) interactions of any given…