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Lionel Morgado - Bioinformatician with a machine learning flavor
Open to new opportunities
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Open to new opportunities

Lionel Morgado

Bioinformatician with a machine learning flavor
University of Groningen • Groningen • Netherlands

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • Portuguese
Programming languages
  • C++
  • Java
  • Javascript
  • MATLAB
  • Python
  • R

TOOLS MAINTAINED

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SAILS

Web

SAILS / SVM-based AGO-affinity Inference for Libraries of Small RNAs

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Provides a method to determine Argonaute AGO-sRNA affinity from the sRNA sequences alone. SAILS is based on a supervised machine learning approach that allows users to detect biologically functional…

Fields of interest

WGS analysis
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Simulates various mating processes. MatSim allows users to mimic both discrete…
Permits users to exploit constraints in signature identification. sigLASSO is a…
RNA-seq analysis
Provides next-generation sequencing (NGS)-based expression profiles and tools…
Permits users to classify reads into barcode bins using the raw read signal.…
Allows users to perform clustering analysis. NNC is a method based on k-means…
Protein interaction analysis
Allows users to forecast interacting proteins. IAS is an application proposing…
A statistical method to identify pathway-level enrichments of genetic…
Identifies genetic variants that alter RNA-binding proteins (RBP)-RNA…