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Logan Kavanaugh - Bacterial Genetics
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Logan Kavanaugh

Bacterial Genetics
University of North Carolina System • University of North Carolina at Charlotte • Charlotte • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Gene expression array analysis
  • English
Programming languages
  • Shell (Bash)

Fields of interest

WGS analysis
Enables to detect serotypes from S. pneumoniae Illumina Next Generation…
Allows users to provide simulations about evolution of bacterial genomes in…
Calculates the mutation distance between two strings of the length…
De novo sequencing analysis
Hierarchizes master regulators (MRs) in human cancer. MR4Cancer is a web…
Scaffolds genomes using paired-end RNA-sequencing reads. P_RNA_scaffolder is a…
Corrects long read hybrid errors. HG-CoLoR combines both (i) the idea to…
Gene expression array analysis
Cluster-select the optimal number of clusters and removes outlier objects.…
Serves for processing Infinium DNA methylation data. SeSAMe consists of light…
Contains a library to process over- and under-representation of certain gene…