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Loredana Le Pera - Bioinformatician
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Loredana Le Pera

Bioinformatician
National Research Council • Rome • Italy

Skills and expertise

Fields of interest
  • WES analysis
  • RNA-seq analysis
  • ChIP-seq analysis
Languages
  • English
  • Italian
Programming languages
  • C
  • Perl
  • PHP
  • Python
  • R
  • Shell (Bash)

Favorites and Collections

Favorites

3USS
Web

Collections

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TOOLS MAINTAINED

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3USS

Web

3USS / 3' Utr Sequence Seeker

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A web-server developed with the aim of giving experimentalists the possibility to automatically identify alternative 3'UTRs (shorter or longer with respect to a reference transcriptome), an…

Fields of interest

WES analysis
Serves for Illumina short read sequencing data. PriLive allows users to remove…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Consists of a genomic context explorer. GeneSpy is a program that aims to…
RNA-seq analysis
Allows long read alignment to large reference genomes by splitting the index…
Classifies biological sequences based on the feature extraction from complex…
Detects prognostic biomarkers and gene modules. G2Vec is a network-based deep…
ChIP-seq analysis
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Facilitates the use of StateHub models to generate browser tracks for…
Makes base calls in low coverage regions. PBHoover is a consensus and…