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Luca Beltrame - Bioinformatician
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Luca Beltrame

Bioinformatician
Istituti di Ricovero e Cura a Carattere Scientifico • Mario Negri Institute for Pharmacological Research • Milan • Italy

Skills and expertise

Fields of interest
  • WES analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
  • Italian
  • Japanese
Programming languages
  • C++
  • Python
  • R

Fields of interest

WES analysis
Constructs patient-specific reports. MTB-Report returns a filtered list of…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
RNA-seq analysis
Classifies protein sequence and identifies remote protein homology via…
Provides a tool for ortholog identification. JustOrthologs focuses on orthologs…
Maps a read against a reference region if and only if its estimated alignment…
Protein interaction analysis
Predicts affinity for novel molecules, makes derivative prioritization and…
Performs computation of distance precision matrix and regularized distance…
Provides a logic-based framework to reconstruct signaling networks by using…