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Luca Roma - plant genomics
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Luca Roma

plant genomics
University of Naples Federico II • Naples • Italy

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
  • Italian
Programming languages
  • Perl
  • Python

Fields of interest

WGS analysis
Executes allele-specific alignment of a set of reads to two reference genomes.…
Allows users to write pipelines in the Go programming language. SciPipe is a…
Forecasts missing values in pan-cancer genomic analysis. DAPL offers a method…
De novo sequencing analysis
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Allows the simultaneous fitting of distributions of fitness effects (DFE)…
Allows users to handle sequencing data with unique molecular identifiers…
RNA-seq analysis
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Offers an approach dedicated to moonlighting long non-coding RNAs (mlncRNAs)…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…