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M silico - gr
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M silico

gr

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Recognizes cancer-related mutation clusters. DMCM is based on kernel density…
Identifies somatic single nucleotide variants (SNVs). S22S detects somatic SNV…
Assists users in extracting DNA sequences around genetic variants. SeqTailor is…
RNA-seq analysis
Aligns raw reads directly against redundant databases. KMA is an alignment…
Assists users for visualizing ancestry data. AncestryView first proceeds by…
Identifies RNA editing sites based on RNA-seq data in organelles based on…
aCGH data analysis
Combines several steps for a high-quality probe and primer design for a variety…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…