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Mahdi Heydari - phd student
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Mahdi Heydari

phd student
Ghent University • Gent • Belgium

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • De novo sequencing analysis
Languages
  • English
Programming languages
  • C++

Fields of interest

Genome edition
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
WGS analysis
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Serves for mutation-based clustering of tumors. ccpwModel's binary variables…
Allows users to optimize a scoring function for pairwise-profile alignment…
De novo sequencing analysis
Permits users to analyze large genomic sequences. QUAST-LG is a module of QUAST…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Estimates genomic island (GI) locations in chromosomal sequences. SWIGIS…