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Marena Trinidad - Bioinformatician and Data Scientist
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Marena Trinidad

Bioinformatician and Data Scientist

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • MS-based untargeted proteomics
Languages
  • English
Programming languages
  • C++
  • Python

Fields of interest

Genome edition
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
Serves as a calculation and visualization tool for high-throughput CRISPR…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
WGS analysis
Allows users to provide simulations about evolution of bacterial genomes in…
Provides a library written in Nim programming language that suits for simple…
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
MS-based untargeted proteomics
Integrates mass spectrometry (MS) data from the intact protein and glycopeptide…
Assists users in open modification spectral library searching. ANN-SoLo is a…
Assists users for quantitative proteomics data analysis. PANDA is an…