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Mari Ferrarini - Post Doctoral Research in Systems Biology and Transcriptomics
Open to new opportunities
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Open to new opportunities

Mari Ferrarini

Post Doctoral Research in Systems Biology and Transcriptomics
French Institute for Research in Computer Science and Automation • Le Chesnay • France

Skills and expertise

Fields of interest
  • Synthetic biology
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • French
  • Portuguese
Programming languages
  • Perl
  • R

Fields of interest

Synthetic biology
Offers a methodology for understanding how different parameters can affect the…
Enables synthetic gene designers to evaluate their own constructs and put codon…
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
RNA-seq analysis
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Classifies protein sequence and identifies remote protein homology via…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Metagenomic sequencing analysis
Provides a tool for ortholog identification. JustOrthologs focuses on orthologs…
Constructs networks and allows users to display prokaryotic pangenomes for both…
Generates "policy prescriptions" for microbiome engineering. MDPbiome builds a…