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Martin Riesing - Metagenomic
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Martin Riesing

Metagenomic
University of Vienna • Vienna • Austria

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • aCGH data analysis
Languages
  • English
  • German
Programming languages
  • Perl
  • R
  • Shell (Bash)

Fields of interest

Genome edition
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
WGS analysis
Deduces tumor purity and ploidy from tumor-normal whole genome sequencing (WGS)…
Allows users to return all read mappings within a given edit distance. FEM is…
Permits visualization and annotation of copy number variations (CNVs) analysis…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Analyzes next-generation sequencing (NGS) from experiments using unique…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…