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Martin Theissen - Quasispecies Analysis
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Martin Theissen

Quasispecies Analysis
University of Duisburg-Essen • Essen • Germany

Skills and expertise

Fields of interest
  • Immune system analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • German
Programming languages
  • C++
  • R

Fields of interest

Immune system analysis
Models tumor immune evasion by integrating expression signatures of T cell…
Offers a method for measuring variant surface glycoprotein (VSG) diversity…
Consists of an open-source deep learning model. MHCSeqNet is a program that can…
De novo sequencing analysis
Enables utilization of available data and accurate inference of species tree…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
Provides a deep neural network base caller for nanopore sequencing. Chiron…
Metagenomic sequencing analysis
Identifies structural variation across (1) a collection of assemblies and (2) a…
Permits parallel, fine-grained pairwise alignment of metagenomes. IMSAME is a…
Calculates anchor points for genome alignment. Spaced Anchor is a pipeline that…