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Martina Bradic - Integrative genomics data anaytics
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Martina Bradic

Integrative genomics data anaytics
Cornell University • Weill Cornell Medicine • New York City • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • NMR-based metabolomics
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

RNA-seq analysis
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Designs polymerase chain reaction (PCR) primers from DNA sequence.…
Implements several different transition kernels for updating a phylogenetic…
BS-seq analysis
Supplies a set of features dedicated to quality check (QC) of next generation…
An indexing scheme to support sequence-based querying of terabyte-scale…
Filters spurious variants caused by mouse reads in patient-derived xenografts…
NMR-based metabolomics
Offers a model investigating longitudinal and progressive dynamics of metabolic…
Assesses the relationships between metabolites in an untargeted metabolomics…
Provides a complete analysis workflow of 1H nuclear magnetic resonance (NMR)…