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Matthew McCormack - Research Scientist Plant Biology
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Matthew McCormack

Research Scientist Plant Biology
Partners HealthCare • Massachusetts General Hospital • Boston • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Perl

Fields of interest

RNA-seq analysis
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
Generates and filters recombinase polymerase amplification (RPA) primers and…
Provides a quick navigation into any set of scores associated to the…
ChIP-seq analysis
Performs computation of distance precision matrix and regularized distance…
Allows users to return all read mappings within a given edit distance. FEM is…
Integrates multiple assayed transcription factors (TFs) bound/unbound DNA…
Gene expression array analysis
Predicts de novo profile generation based on sequence context. SPBuild…
Provides a neighbor protein structure retrieval method. ContactLib scans…
Aims to characterize non-model organisms. IDP-denovo allows users to handle…