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Matthew Whiteside - Microbiology, Genomics and Infectious Disease Bioinformatician
Open to new opportunities
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Open to new opportunities

Matthew Whiteside

Microbiology, Genomics and Infectious Disease Bioinformatician
Health Canada • Public Health Agency of Canada • Ottawa • Canada

Skills and expertise

Fields of interest
  • Drug design
  • WGS analysis
  • De novo sequencing analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

Drug design
Constructs target prioritization and drug repositioning hypotheses that are…
Evaluates synthetic complexity based directly on published reaction data.…
Constructs custom chemical genetics libraries for gene-sets of interest.…
WGS analysis
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Simulates various mating processes. MatSim allows users to mimic both discrete…
Encrypts, in a secure way, genomic data in several formats, and also compacts…
De novo sequencing analysis
Simplifies downstream utilization of high-throughput sequencing (HTS) data.…
Assists users in reading TIGER-rate file or other rate files. RatePartitions…
Permits users to test gene-set enrichment directly from de novo (DN) and rare…