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Michael Gribskov - Genomics for the People
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Michael Gribskov

Genomics for the People
Purdue University System • Purdue University • West Lafayette • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Fortran
  • Groovy
  • Java
  • Javascript
  • Lua
  • MATLAB
  • Pascal
  • Perl
  • Python
  • R
  • Shell (Bash)
  • Other

Fields of interest

De novo sequencing analysis
Validates scaffolding methods. Repeat aware scaffolding evaluation framework is…
Serves for cancer-related gene prioritization. MGOGP is an algorithm that can…
Removes the biases inherent in raw Unique Molecular Identifier (UMI) counts and…
RNA-seq analysis
Assists users in pre-processing of read data. BLR is a library preparation…
Enables adaptive correlation and covariance matrix shrinkage. CorShrink is a…
Constructs publication-quality visualizations from Cuffdiff, edgeR, and DESeq2.…
Gene expression array analysis
Identifies optimal number of clusters while partitioning data. Shrinkage…
Permits researchers to conduct investigation and construct high-quality…
Allows users to perform class discovery. M3C is based on a reference-based…