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Mike_D - Bioinformatician
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Ontario Institute for Cancer Research • Toronto • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
  • English
Programming languages
  • Perl
  • Python
  • R

Reviews and Discussions


Control-FREEC 2018-02-21, 20:58:51
Works okay. Just can't seem to make it take into account the mappability files when not using matched samples.
MrMosaic 2018-02-21, 20:45:24
Hard to install (bugs) and segmentation fault at first step of analysis... Do not recommend.


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Fields of interest

WGS analysis
Identifies convergent changes. PCOC is based on the following definition: a…
Allows users to infer population structure. POPSTR is a Bayesian integrative…
Assists users with model selection in model-based clustering of mixed-data with…
WES analysis
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Assists users for visualizing ancestry data. AncestryView first proceeds by…
Permits users to exploit constraints in signature identification. sigLASSO is a…
RNA-seq analysis
Corrects batch effects (from multiple confounding variables) and library depth.…
Generates a tiered report that will aid the interpretation of individual cancer…
Integrates multi-omics profiles for phenotype prediction. iOmicsPASS utilizes…