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Mohamed Fares - Bioinformatics
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Mohamed Fares

Bioinformatics
Nile University • Cairo • Egypt

Skills and expertise

Fields of interest
  • Drug design
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • Arabic
  • English
Programming languages
  • Java

Fields of interest

Drug design
Evaluates synthetic complexity based directly on published reaction data.…
Provides a hybrid ligand/receptor structure-based docking. LigBEnD was…
Changes the molecular configurations found at a time delay τ along the…
De novo sequencing analysis
Allows calculation of the state of any node in a phylogeny under the marginal…
Uses existing tools from the Galaxy ToolShed, as well as providing additional…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
RNA-seq analysis
Permits identification of alternative first exons (FEs) and alternative tandem…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Provides three different tools for identification of differentially expressed…